Tagged medical

Look up ClinVar pathogenicity and review status to judge variant significance

Map rsIDs to genomic coordinates and pull dbSNP variant annotations

Check gnomAD population allele frequencies to judge how rare a variant is

Call HLA alleles from sequencing data with OptiType, HLA-HD or arcasHLA

Annotate variants with ClinVar, gnomAD, COSMIC and dbSNP data in one query

Look up drug gene interactions and dosing guidelines in PharmGKB and CPIC

Calculate polygenic risk scores from GWAS summary statistics with LDpred2

Extract mutational signatures from somatic variants with SigProfiler

Calculate tumor mutational burden from panel or exome data with clinical cutoffs

Prioritize candidate disease variants by pathogenicity, frequency and evidence

Annotate copy number calls with affected genes, pathways and clinical notes

Find tumor neoantigens from somatic mutations and patient HLA with pVACtools

Stratify patients by fusing multi omics data into similarity networks

Annotate variants with consequences and clinical data using VEP and SnpEff

Interpret variant pathogenicity with ClinVar and ACMG guidelines for diagnostics

Search PubMed, preprints, clinical trials and FDA drug labels in one query

Build a quick emergency medical card with allergies, medicines and implants

Assess family medical history, inherited risk and prevention steps

Build FHIR REST endpoints with valid resources, errors and SMART authorization

Extract symptoms, medications, lab values and diagnoses from patient messages

Query ChEMBL, PubMed, ClinicalTrials.gov and OpenTargets for drug repurposing research

Search medRxiv medical preprints with natural language queries

Explain doctor letters, test results and prescriptions in plain, personal language

Review prior authorization requests against coverage policy and medical necessity

Explain events and behavior through cognitive, social and clinical psychology

Ingest TCGA expression, sample sheets and clinical data into AnnData with omicverse

Identify traditional Chinese medicine constitution types and suggest wellness tips

Interpret somatic cancer mutations using CIViC, cBioPortal and therapy evidence

Find clinical practice guidelines from NICE, WHO, ADA and NCCN with citations

Validate drug targets on druggability, safety, clinical precedent and evidence

Stratify patients for precision medicine using genomic, clinical and therapy data

Recommend FDA-approved cancer therapies and trials from a tumor mutation profile

Classify structural variants and score pathogenicity with ACMG-adapted criteria

Classify variants with ACMG criteria using ClinVar, gnomAD and CIViC evidence

Write a therapeutic indication dossier on patients, standard of care and trials

Look up Ni Haisha TCM course material on Shang Han Lun, Jingui and clinical cases

Search and analyze clinical trials across ClinicalTrials.gov and EU CTIS offline

Browse, search and triage New England Journal of Medicine articles from the terminal

Turn long medical drafts into SCI-style abstracts in English and Chinese

Resolve ambiguous medical abbreviations using clinical context and specialty

Simulate adaptive clinical trials with interim analyses and stopping rules

Generate interactive anatomy quizzes for medical education and self-study

Plan cell and animal experiments to validate computational or clinical findings

Turn clinical narratives into structured, de-identified SOAP notes

Extract clinical trial baseline characteristics from article text or a PMID

Practice clinical reasoning and literature appraisal with a medicine mentor persona

Map clinical and biomedical text to SNOMED CT and other standard ontologies

Structure protocols for diagnostic, efficacy, etiology and prognosis clinical studies

Write retrospective or prospective cohort protocols with enrollment and follow-up rules